gitlab.pasteur.fr / bli / bioinfo_utils
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License: gpl-3.0+
Language:
Dependencies parsed at:
73
Created at: over 8 years ago
Updated at: over 1 year ago
Pushed at: over 1 year ago
Last synced at: over 1 year ago
gtf2bed/Haskell/gtf2bed.cabal
hackage
- base >=4.7 && <5
- bytestring *
- base >=4.7 && <5
- bytestring *
- matplotlib *
- pandas *
- deeptools *
- husl *
- matplotlib *
- pandas *
- pyBigWig *
- pysam *
- rpy2 *
- scikit-learn *
- seaborn *
- mappy *
- matplotlib *
- numpy *
- pandas *
- pyBigWig *
- rpy2 *
- scikit-learn *
- scipy *
- seaborn *
requirements.txt
pypi
- Cython ==0.29.21
- PyYAML ==5.3.1
- beautifulsoup4 ==4.9.1
- cytoolz ==0.10.1
- deepTools ==3.5.0
- flake8 ==3.8.3
- fs ==2.4.11
- husl ==4.0.3
- ipython ==7.18.1
- mappy ==2.17
- matplotlib ==3.3.2
- numpy ==1.19.2
- pandas ==1.1.2
- pyBigWig ==0.3.17
- pylint ==2.6.0
- pysam ==0.16.0.1
- regex ==2020.7.14
- requests ==2.25.0
- rpy2 ==3.2.5
- scikit-learn ==0.23.2
- scipy ==1.5.2
- seaborn ==0.11.0
- snakemake ==5.24.2
- tabulate ==0.8.7