forgemia.inra.fr
formationcalcul2022/formation-git
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 5
game-theory-tools-group/gtnash
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 4
git-gitlab-paca/support-de-formation
[Présentation en ligne sur GitLab Pages](https://git-gitlab-paca.pages.mia.inra.fr/support-de-formation/)
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 26 - Forks: 4
hackathon-portail-calcul/existant
PCS (Portail Calcul Scientfique) - Ingenum
Last synced at: over 1 year ago - Stars: 0 - Forks: 4
eq-record/record-team
A static [web site](https://eq-record.pages.mia.inra.fr/record-team/) to present the team
Last synced at: over 1 year ago - Stars: 2 - Forks: 3
elisemaigne/2021_git
Présentation de git et de son écosystème dans le cadre des rencontres ingénieurs statisticiens de Toulouse (dec. 2021).
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 2
genotoul-bioinfo/metagwgs
metagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.
Last synced at: over 1 year ago - Stars: 9 - Forks: 2
umrf/ranomaly
https://umrf.pages.mia.inra.fr/ranomaly/
Last synced at: over 1 year ago - Stars: 2 - Forks: 2
metexplore/met4j
Java library for metabolic networks
Last synced at: over 1 year ago - Stars: 3 - Forks: 2
lbe/opensilexlbe/opensilex-dev
Projet regroupant les codes de l'outil opensilex, systèmes d'Information ouverts pilotés par des ontologies
Last synced at: over 1 year ago - Stars: 0 - Forks: 2
bios4biol/workflows
List of workflows (nextflow/snakemake) tested for Genotoul Cluster.
Last synced at: over 1 year ago - Stars: 2 - Forks: 2
ecosys-rtt/atelier-rtt-01
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 2
genotoul-bioinfo/tips-for-sustainable-computing
Provide tips to the platform users to use less resources.
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
rdg/entrepot/api-examples/apis-exemples
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
phenotic/publique/ordinalclustering
A method to compare a clustering to a classification with ordinal classes.
Last synced at: over 1 year ago - Stars: 0 - Forks: 1
dipso/thesaurus-inrae
Exploitation et maintenance du thésaurus INRAE, thésaurus ouvert et partagé couvrant les domaines de recherche d’INRAE. Il sert de référentiel au sein de l’institut pour indexer et annoter des documents, pages web, descriptions d’activités, jeux de d
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 3 - Forks: 1
umr-astre/asf-challenge
Collaborative repository of the ASTRE team for the ASF challenge. https://www6.inrae.fr/asfchallenge/
Last synced at: over 1 year ago - Stars: 0 - Forks: 1
ateliers_codons/test_git
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
ecosys-rtt/presentation-rtt
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 1
metabohub/web-components/viz-core
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 1
efno/bac-a-sable-efno
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
pappso/pappsomspp
PAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...
Last synced at: over 1 year ago - Stars: 0 - Forks: 1
canular/canular-website
Les pages du site CANULAR générées avec HUGO
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
genotoul-bioinfo/use-nextflow-nfcore-course
Cours accessible à https://genotoul-bioinfo.pages.mia.inra.fr/use-nextflow-nfcore-course/
Last synced at: over 1 year ago - Stars: 4 - Forks: 1
genotoul-bioinfo/jvenn
jvenn is a plug-in for the jQuery Javascript library. It is a flexible tool, based upon the venny tool first developed by J.C Oliveros (Oliveros, J.C (2007) VENNY, An integrative tool for comparing lists with Venn Diagrams).
Last synced at: over 1 year ago - Stars: 1 - Forks: 1
inter_cati_omics/docker-galaxy-rstudio-data-integration
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
elisemaigne/2022_datatable
Formation sur le package R data.table
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
elisemaigne/formation_shiny
Supports pour la formation shiny - Plateforme de Biostatistique – Génopole Toulouse Midi-Pyrénées
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 1
inter_cati_omics/reproductibility
Example GitBook site using GitLab Pages: https://pages.gitlab.io/gitbook
Last synced at: over 1 year ago - Stars: 1 - Forks: 1
lisc/sonar-web
Site web du projet SONAR (Synthèse des dOnnées bioéconomiques et iNdicateurs trAnsitions des territoires uRbains) du métaprogramme BETTER https://better.hub.inrae.fr/
Last synced at: over 1 year ago - Stars: 0 - Forks: 1
omnicrobe/omnicrobe-database
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 1
hackathon-portail-calcul/hackathon_organisation
Last synced at: over 1 year ago - Stars: 4 - Forks: 1
sweden/sweden_adaptation
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
bios4biol/Help4MultiQC
https://bios4biol.pages.mia.inra.fr/Help4MultiQC
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 1
sk8/sk8-apps/sk8-demo
L'application template de base. * simple : [https://sk8-demo.sk8.inrae.fr](https://sk8-demo.sk8.inrae.fr) * catalogue : [https://shiny.sk8.inrae.fr/app/sk8-demo](https://shiny.sk8.inrae.fr/app/sk8-demo)
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
umr-gdec/nf-remapmarkers
scripts to remap markers as pairs of bait sequences or context sequences.
Last synced at: over 1 year ago - Stars: 1 - Forks: 1
QTL/spell-qtl
Species Perscrutandis Enixe Locis Locabuntur.
Last synced at: over 1 year ago - Stars: 0 - Forks: 1
umr-1202-biogeco/snakemake_singularity_hpc
Tutorial example for creation of a snakemake workflow using a singularity container on a hpc
Last synced at: over 1 year ago - Stars: 0 - Forks: 1
tango/tango_models
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
pherosensor/pherosensor-toolbox
Toolbox for the inverse problem solution to identify sources of pheromone emission.
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
beyond/front-landing-page
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
formationcalcul2022/formation-singularity
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 3 - Forks: 1
GNet/appinetwork
Construction and Analysis of Protein-Protein Interactions (PPI) NETWORKS for complexes and biological processes
Last synced at: over 1 year ago - Stars: 0 - Forks: 1
umr-gdec/wheatdata
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
gafl/pipelines_snakemake/rnaseq_de_snps
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
formationcalcul2023/formation-linux
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 1
inter_cati_omics/hackathon_octobre2021/hackathon_datascience_2021
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 3 - Forks: 1
cropmetapop/cmpanalyzer
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
formationcalcul2023/formation-slurm
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 1
irhs-bioinfo/biseps
Bisulfite Sequencing Processing Software : Snakemake Pipeline
Last synced at: over 1 year ago - Stars: 1 - Forks: 1
pole-migrateurs/Acoustic/acoustic-gui
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
omnicrobe/omnicrobe_web
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 1
inter_cati_omics/hackathon_octobre2021/shinyDataScience
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
dipso/kubespray
Fork from https://github.com/kubernetes-sigs/kubespray.git
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
umr-tetis/stac/simplestac
STAC tools to simplify STAC use: local STAC creation, filter and process STAC ItemCollections (local and remote). __[Documentation](https://umr-tetis.pages.mia.inra.fr/stac/simplestac)__
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 1
metagenopolis/benchmark_mock
Benchmark second and third generation sequencing technologies on 3 synthetic microbial communities
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1
inter_cati_omics/hackathon_snakemake_singularity_stats
Singularity receipe for stats software stack used in snakemake short tutorial
Last synced at: over 1 year ago - Stars: 0 - Forks: 0
umrf/utopia
UTOPIA: an automatically UpdaTed, cOmPlete and consistent ITS reference dAtabase
Last synced at: over 1 year ago - Stars: 1 - Forks: 0
umr-astre/difuse
Projet Difuse Activite 1: Caractérisation de la diversité des pratiques et des points de vue des acteurs manifestant leur volonté de s’engager dans le changement face aux urgences socio-écologiques au sein la Recherche Pour le Développement.
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
urgi-anagen/te_finder
A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.
Last synced at: over 1 year ago - Stars: 1 - Forks: 0
umr-astre/confint_ratio
Confidence intervals for a ratio of variables. https://umr-astre.pages.mia.inra.fr/confint_ratio/
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
dipso/bridge-datainrae-nextcloud
App Nextcloud permettant de publier des fichiers du Nextcloud INRAE vers DataINRAE
Last synced at: over 1 year ago - Stars: 1 - Forks: 0
get-nextflow-ngl-bi/test-data
Repository of test data
Last synced at: over 1 year ago - Stars: 0 - Forks: 0
singularity/bioinfo/bcftools_v1.15
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
umr-astre/sit-sudan
https://umr-astre.pages.mia.inra.fr/sit-sudan
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
umr-astre/covid19-mortality
A quick overview of the changes of Covid-19 mortality in the most affected countries of the European Union + the United Kingdom and of Africa. https://umr-astre.pages.mia.inra.fr/covid19-mortality/
Last synced at: over 1 year ago - Stars: 0 - Forks: 0
migale/wf_caviar
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
geekus-biologicae/gitrstudio
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
umr-astre/geonetwork
Networks/graphs with geo-localised nodes https://umr-astre.pages.mia.inra.fr/geonetwork/
Last synced at: over 1 year ago - Stars: 0 - Forks: 0
canular/presentation-canular
Projet pour élaborer le support de présentation du projet CANULAR. Le document est en LaTeX et le CI/CD permet de générer directement un fichier PDF.
Last synced at: over 1 year ago - Stars: 0 - Forks: 0
asterics/user_documentation
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
umr-astre/topomatch
Match toponyms by similarity
Last synced at: over 1 year ago - Stars: 0 - Forks: 0
dipso/onyxia-helm-charts-interactive-services
Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
genotoul-bioinfo/jflow
We introduce jflow, a Workflow Management System (WMS), composed of Jquery plugins which can easily be embedded in any WEB application and a Python library providing all requested features to setup, run and monitor workflows.
Last synced at: over 1 year ago - Stars: 0 - Forks: 0
umr-astre/capiche
Epidemics at the interface between domestic and wild swines in Corse (ContActs Pigs CorsE). https://umr-astre.pages.mia.inra.fr/capiche/
Last synced at: over 1 year ago - Stars: 0 - Forks: 0
agroecoperenne/scripting/python-module
A python module to explore and use the agroecoperenne database
Last synced at: over 1 year ago - Stars: 0 - Forks: 0
genotoul-bioinfo/dgenies-viewer
A viewer using D-Genies
Last synced at: over 1 year ago - Stars: 0 - Forks: 0
metexplore/cbm/fvabiomarkers
Juliette's internship project
Last synced at: over 1 year ago - Stars: 1 - Forks: 0
formation/formation-python-inrae
Fichiers de la formation Python, Inra de Bourgogne Franche-Compté. Formateur : Arnaud Mounier.
Last synced at: over 1 year ago - Stars: 0 - Forks: 0